TRPP1

Gene: PkD2
Alias: TRPP1

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Gene

Species	NCBI gene ID	Chromosome	Position
Human	5311	4	70142
Mouse	18764	5	54306
Rat	498328	14	43320

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Transcript

Species	NCBI accession	Length (nt)
Human	NM_000297.4	5089
Mouse	NM_008861.3	5221
Rat	NM_001191934.1	4851

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Protein Isoforms

Species	Uniprot ID	Length (aa)
Human	Q13563	968
Mouse	O35245	966
Rat	D4A5F1	966

Isoforms

Transcript

Length (nt)

Protein

Length (aa)

Variant

Isoform

Known

NR_156488.2

4968

transcript variant 2

NM_000297.4

5089

NP_000288.1

968

transcript variant 1

Predicted

XM_011532028.3

4864

XP_011530330.1

893

transcript variant X1

isoform X1

XM_011532029.2

4367

XP_011530331.1

728

transcript variant X2

isoform X2

XM_011532030.3

4409

XP_011530332.1

688

transcript variant X3

isoform X3

XM_054350187.1

4864

XP_054206162.1

893

transcript variant X1

isoform X1

XM_054350188.1

4367

XP_054206163.1

728

transcript variant X2

isoform X2

XM_054350189.1

4409

XP_054206164.1

688

transcript variant X3

isoform X3

Known

NM_008861.3

5221

NP_032887.3

966

Predicted

XR_001784633.3

13035

transcript variant X2

XR_003955591.2

12867

transcript variant X3

XM_006534815.5

12988

XP_006534878.1

910

transcript variant X1

isoform X1

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Post-Translational Modifications

PTM

Position

Type

Modified residue

Phosphoserine

Modified residue

Phosphoserine

Modified residue

137

Omega-N-methylarginine

Modified residue

801

Phosphoserine

Modified residue

808

Phosphoserine

Modified residue

812

Phosphoserine

Modified residue

829

Phosphoserine

Glycosylation

299

N-linked (GlcNAc...) asparagine

Glycosylation

305

N-linked (GlcNAc...) asparagine

Glycosylation

328

N-linked (GlcNAc...) (complex) asparagine

Glycosylation

362

N-linked (GlcNAc...) asparagine

Glycosylation

375

N-linked (GlcNAc...) asparagine

Disulfide bond

Modified residue

Phosphoserine

Modified residue

Phosphoserine

Modified residue

135

Omega-N-methylarginine

Modified residue

799

Phosphoserine

Modified residue

806

Phosphoserine

Modified residue

810

Phosphoserine

Modified residue

827

Phosphoserine

Glycosylation

297

N-linked (GlcNAc...) asparagine

Glycosylation

303

N-linked (GlcNAc...) asparagine

Glycosylation

326

N-linked (GlcNAc...) asparagine

Glycosylation

360

N-linked (GlcNAc...) asparagine

Glycosylation

373

N-linked (GlcNAc...) asparagine

Disulfide bond

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Structure

TRPP1 predicted AlphaFold size

Species	Area (Å²)	Reference
Human	7910.96	source
Mouse	7840.82	source
Rat	6498.73	source

Methodology for AlphaFold size prediction and disclaimer are available here

References

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Credits

To cite this page: [Contributors] Channelpedia https://channelpedia.epfl.ch/wikipages/182/ , accessed on 2024 Apr 20

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