ClC5

Description: chloride channel 5
Gene: Clcn5
Alias: clc-5, clcn5

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Gene

Species	NCBI gene ID	Chromosome	Position
Human	1184	X	176634
Mouse	12728	X	165548
Rat	25749	X	154624

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Transcript

Species	NCBI accession	Length (nt)
Human	NM_001127899.4	10122
Mouse	NM_016691.4	3788
Rat	NM_001414393.1	8662

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Protein Isoforms

Species	Uniprot ID	Length (aa)
Human	P51795	816
Mouse	Q9WVD4	816
Rat	P51796	816

Isoforms

Transcript

Length (nt)

Protein

Length (aa)

Variant

Isoform

Known

NM_001127899.4

10122

NP_001121371.1

816

transcript variant 1

isoform a

NM_001127898.4

9863

NP_001121370.1

816

transcript variant 2

isoform a

NM_001272102.2

643

NP_001259031.1

transcript variant 5

isoform c

NM_000084.5

9472

NP_000075.1

746

transcript variant 3

isoform b

NM_001282163.2

9543

NP_001269092.1

766

transcript variant 4

isoform d

Predicted

XM_017029258.2

10134

XP_016884747.1

820

transcript variant X1

isoform X1

XM_017029257.2

9875

XP_016884746.1

820

transcript variant X2

isoform X1

XM_047441808.1

9569

XP_047297764.1

746

transcript variant X4

isoform X2

XM_047441807.1

9514

XP_047297763.1

746

transcript variant X3

isoform X2

XM_054326432.1

10134

XP_054182407.1

820

transcript variant X1

isoform X1

XM_054326433.1

9875

XP_054182408.1

820

transcript variant X2

isoform X1

XM_054326434.1

9569

XP_054182409.1

746

transcript variant X4

isoform X2

Known

NM_001243762.1

4170

NP_001230691.1

816

transcript variant 2

isoform 2

NM_016691.4

3788

NP_057900.3

746

transcript variant 1

isoform 1

Predicted

XR_004940325.1

2939

transcript variant X8

XM_006527562.5

8803

XP_006527625.1

828

transcript variant X5

isoform X3

XM_011247445.4

8836

XP_011245747.1

839

transcript variant X4

isoform X2

XM_011247442.3

8872

XP_011245744.1

851

transcript variant X1

isoform X1

XM_011247443.4

8959

XP_011245745.1

851

transcript variant X2

isoform X1

XM_011247444.4

8977

XP_011245746.1

851

transcript variant X3

isoform X1

XM_036161803.1

8852

XP_036017696.1

816

transcript variant X6

isoform X4

XM_011247446.4

8637

XP_011245748.1

812

transcript variant X7

isoform X5

Known

NM_017106.2

2586

NP_058802.2

746

isoform 2

NM_001414393.1

8662

NP_001401322.1

816

isoform 1

Predicted

XM_039099511.1

8689

XP_038955439.1

816

transcript variant X1

isoform X1

XM_039099512.1

8540

XP_038955440.1

809

transcript variant X2

isoform X2

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Post-Translational Modifications

PTM

Position

Type

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Structure

ClC5 predicted AlphaFold size

Species	Area (Å²)	Reference
Human	4488.34	source
Mouse	5523.61	source
Rat	4503.25	source

Methodology for AlphaFold size prediction and disclaimer are available here

References

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Credits

To cite this page: [Contributors] Channelpedia https://channelpedia.epfl.ch/wikipages/107/ , accessed on 2024 Apr 20

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