TRPM1

Description: transient receptor potential cation channel, subfamily M, member 1
Gene: Trpm1
Alias: TRPM1

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Gene

Species	NCBI gene ID	Chromosome	Position
Human	4308	15	160095
Mouse	17364	7	120047
Rat	361586	1	116538

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Transcript

Species	NCBI accession	Length (nt)
Human	NM_001252020.2	5887
Mouse	NM_018752.3	2928
Rat	NM_001037734.1	5030

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Protein Isoforms

Species	Uniprot ID	Length (aa)
Human	Q7Z4N2	1603
Mouse	Q2TV84	1622
Rat	Q2WEA5	1628

Isoforms

Transcript

Length (nt)

Protein

Length (aa)

Variant

Isoform

Known

NM_001252020.2

5887

NP_001238949.1

1642

transcript variant 1

isoform 1

NM_002420.6

5701

NP_002411.3

1603

transcript variant 2

isoform 2

NM_001252024.2

5787

NP_001238953.1

1625

transcript variant 3

isoform 3

NM_001252030.2

986

NP_001238959.1

136

transcript variant 4

isoform 4

Predicted

XM_054331796.1

5719

XP_054187771.1

1539

transcript variant X1

isoform X1

XM_054331797.1

3293

XP_054187772.1

893

transcript variant X2

isoform X2

XM_054330024.1

5719

XP_054185999.1

1539

transcript variant X1

isoform X1

XM_054330025.1

3293

XP_054186000.1

893

transcript variant X2

isoform X2

XM_054377959.1

5719

XP_054233934.1

1539

transcript variant X3

isoform X3

XM_054377960.1

3293

XP_054233935.1

893

transcript variant X4

isoform X4

Known

NM_001039104.2

5711

NP_001034193.2

1622

transcript variant 2

isoform 2

NM_018752.3

2928

NP_061222.3

542

transcript variant 1

isoform 1

Predicted

XM_017322013.2

2785

XP_017177502.1

542

transcript variant X2

isoform X2

XM_017322012.3

7761

XP_017177501.1

918

transcript variant X1

isoform X1

Known

NM_001037734.1

5030

NP_001032823.1

1628

transcript variant 1

isoform 1

NM_001037733.1

5012

NP_001032822.1

1622

transcript variant 2

isoform 2

Predicted

XM_039082296.1

3679

XP_038938224.1

910

transcript variant X1

isoform X1

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Post-Translational Modifications

PTM

Position

Type

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Structure

TRPM1 predicted AlphaFold size

Species	Area (Å²)	Reference
Human	10358.44	source
Mouse	9241.30	source
Rat	10124.51	source

Methodology for AlphaFold size prediction and disclaimer are available here

References

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Credits

To cite this page: [Contributors] Channelpedia https://channelpedia.epfl.ch/wikipages/165/ , accessed on 2024 Apr 19

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