TRPC1

Description: transient receptor potential cation channel, subfamily C, member 1
Gene: Trpc1
Alias: TRPC1

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Gene

Species	NCBI gene ID	Chromosome	Position
Human	7220	3	83854
Mouse	22063	9	45313
Rat	89821	8	50875

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Transcript

Species	NCBI accession	Length (nt)
Human	NM_001251845.2	4561
Mouse	NM_011643.4	4549
Rat	NM_001413355.1	4588

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Protein Isoforms

Species	Uniprot ID	Length (aa)
Human	P48995	793
Mouse	Q61056	793
Rat	Q9QX01	759

Isoforms

Transcript

Length (nt)

Protein

Length (aa)

Variant

Isoform

Known

NM_001251845.2

4561

NP_001238774.1

793

transcript variant 1

isoform 1

NM_003304.5

4459

NP_003295.1

759

transcript variant 2

isoform 2

NM_001413363.1

4315

NP_001400292.1

711

transcript variant 5

isoform 5

NM_001413381.1

3838

NP_001400310.1

552

transcript variant 12

isoform 12

NM_001413362.1

4327

NP_001400291.1

715

transcript variant 4

isoform 4

NM_001413375.1

4406

NP_001400304.1

695

transcript variant 7

isoform 7

NM_001413378.1

4262

NP_001400307.1

647

transcript variant 9

isoform 9

NM_001413377.1

4304

NP_001400306.1

661

transcript variant 8

isoform 8

NM_001413379.1

4160

NP_001400308.1

613

transcript variant 10

isoform 10

NM_001413382.1

3683

NP_001400311.1

454

transcript variant 13

isoform 13

NM_001413380.1

4028

NP_001400309.1

569

transcript variant 11

isoform 11

NM_001413385.1

3245

NP_001400314.1

308

transcript variant 16

isoform 16

NM_001413383.1

3436

NP_001400312.1

418

transcript variant 14

isoform 14

NM_001413384.1

3292

NP_001400313.1

370

transcript variant 15

isoform 15

NM_001413386.1

3152

NP_001400315.1

277

transcript variant 17

isoform 17

NM_001413361.1

6050

NP_001400290.1

743

transcript variant 3

isoform 3

NM_001413376.1

5948

NP_001400305.1

709

transcript variant 6

isoform 6

Predicted

XR_007095723.1

2317

transcript variant X4

XR_007095722.1

2283

transcript variant X3

XM_047448842.1

1998

XP_047304798.1

464

transcript variant X7

isoform X7

XM_047448840.1

2271

XP_047304796.1

537

transcript variant X5

isoform X5

XM_047448841.1

2169

XP_047304797.1

503

transcript variant X6

isoform X6

XM_017007121.3

5358

XP_016862610.1

732

transcript variant X1

isoform X1

XM_047448839.1

5256

XP_047304795.1

698

transcript variant X2

isoform X2

XR_008486788.1

2317

transcript variant X4

XR_008486787.1

2283

transcript variant X3

XM_054347736.1

1998

XP_054203711.1

464

transcript variant X7

isoform X5

XM_054347734.1

2271

XP_054203709.1

537

transcript variant X5

isoform X3

XM_054347735.1

2169

XP_054203710.1

503

transcript variant X6

isoform X4

XM_054347732.1

14812

XP_054203707.1

732

transcript variant X1

isoform X1

XM_054347733.1

14709

XP_054203708.1

698

transcript variant X2

isoform X2

Known

NM_001311123.2

4447

NP_001298052.2

759

transcript variant 2

isoform 2

NM_011643.4

4549

NP_035773.2

793

transcript variant 1

isoform 1

NM_001413354.1

4292

NP_001400283.1

661

isoform 6

NM_001413352.1

4426

NP_001400281.1

752

isoform 4

NM_001413353.1

4394

NP_001400282.1

695

isoform 5

NM_001413351.1

4528

NP_001400280.1

786

isoform 3

Predicted

XR_003947858.2

4736

transcript variant X7

XM_006511056.5

4325

XP_006511119.1

661

transcript variant X3

isoform X3

XM_006511055.5

4427

XP_006511118.1

695

transcript variant X2

isoform X2

XM_006511053.5

4561

XP_006511116.1

802

transcript variant X1

isoform X1

XM_030244242.2

4502

XP_030100102.1

641

transcript variant X4

isoform X4

XM_006511057.3

3724

XP_006511120.1

648

transcript variant X5

isoform X5

XM_030244244.2

3125

XP_030100104.1

396

transcript variant X9

isoform X8

XM_030244243.1

2302

XP_030100103.1

602

transcript variant X6

isoform X6

XM_011242717.4

1961

XP_011241019.1

454

transcript variant X8

isoform X7

Known

NM_053558.2

3989

NP_446010.2

759

isoform 2

NM_001413355.1

4588

NP_001400284.1

793

isoform 1

Predicted

XM_008766568.3

4565

XP_008764790.1

809

transcript variant X1

isoform X1

XM_039082220.1

3873

XP_038938148.1

680

transcript variant X5

isoform X5

XM_039082218.1

3975

XP_038938146.1

714

transcript variant X3

isoform X3

XM_039082217.1

4396

XP_038938145.1

802

transcript variant X2

isoform X2

XM_039082219.1

7240

XP_038938147.1

703

transcript variant X4

isoform X4

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Post-Translational Modifications

PTM

Position

Type

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Structure

TRPC1 predicted AlphaFold size

Species	Area (Å²)	Reference
Human	7106.64	source
Mouse	7459.80	source
Rat	7367.19	source

Methodology for AlphaFold size prediction and disclaimer are available here

References

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Credits

To cite this page: [Contributors] Channelpedia https://channelpedia.epfl.ch/wikipages/155/ , accessed on 2024 Nov 21

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